Versuchsangebot im Winter Term 2017/18

AG - Schwerpunkt Astro- und Geophysik

BK - Schwerpunkt Biophysik und Komplexe Systeme

FM - Schwerpunkt Festköper- und Materialphysik

KT - Schwerpunkt Kern- und Teilchenphysik

BK.ABB

Analysis of Brownian Motion ...

BK.GAS

Gliding Assays: Measurement of ATP Dep.

BK.LIP

Lipid Monolayers – Film Balance

BK.MDS

Molecular Dynamics Simulations of Proteins

BK.MIF

Microfluidics

BK.NLF

Nd:YAG Laser and SHG

BK.NSE

Nanostructuring ...

BK.PKR

Phase Contrast Radiography

BK.SLM

X-ray reflectivity study of lipid membranes

BK.STM

STED Microscopy

BK.TRS

Total Reflection of X-rays ...

AG.RBK

Rayleigh-Bénard Convection

Versuch

BK.MDS

Winter Term 2017/18 - Schwerpunkt Biophysik und Komplexe Systeme

Molecular Dynamics Simulations of Proteins

Molecular dynamics simulations are a recent method for describing the dynamics of macromolecules such as proteins, lipids or synthetic polymers. The movements of all the individual atoms of a system are calculated here by computer-based numerical integration. The aim of this experiment is to familiarize you with the basics of this method. For this purpose, simulations of argon gas and later of a small protein are carried out. The necessary steps for creating the simulation systems are carried out independently. The analysis provides an insight into several specific analysis possibilities of the molecular dynamics simulation of proteins and their comparison with respect to conventionally determined quantities.

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Betreuer:

Dr. G. Bubnis

Prüfer:

Prof. H. Grubmüller

Standort:

MPI f. Biophysikal. Chemie, Turm VI, EG, E17.3

Belegung im Winter Term 2017/18

Anleitung BK.MDS (343k)

Sprache(n)

E